Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PCPG rs17227064 chr16:89816314 A/G 0.000179 176 25.87 20.17 36.37 KM Plot
PCPG rs17227085 chr16:89815321 C/T 0.000179 176 25.87 20.17 36.37 KM Plot
PCPG rs17227149 chr16:89813988 T/A 0.000167 177 25.87 20.17 36.37 KM Plot
PCPG rs17227263 chr16:89810598 G/A 0.000179 176 25.87 20.17 36.37 KM Plot
PCPG rs17227466 chr16:89803794 T/TG 0.000188 175 25.87 20.2 36.37 KM Plot
PCPG rs17229052 chr21:38441262 C/G 8.39E-9 177 25.08 25.87 3.83 KM Plot
PCPG rs17232178 chr10:131945345 A/T 0 178 25.47 24.7 3.17 KM Plot
PCPG rs17232533 chr16:89859035 G/A 0.000159 177 25.87 20.37 36.37 KM Plot
PCPG rs17232630 chr16:89851179 C/T 0.000168 177 25.87 20.2 36.37 KM Plot
PCPG rs17232665 chr16:89850382 T/C 0.000168 177 25.87 20.2 36.37 KM Plot
PCPG rs17232735 chr16:89849104 A/G 0.000164 175 25.87 21.55 36.37 KM Plot
PCPG rs17232805 chr16:89843189 A/C 0.000168 177 25.87 20.2 36.37 KM Plot
PCPG rs17232840 chr16:89842479 T/C 0.000168 177 25.87 20.2 36.37 KM Plot
PCPG rs17232903 chr16:89840453 G/C 0.000181 176 25.87 20.2 36.37 KM Plot
PCPG rs17232910 chr16:89839766 G/C 0.000168 177 25.87 20.2 36.37 KM Plot